Configuring HistoQC

Basic Usage

Alternatively, one can specify their own modified config file using an absolute or relative filename:

histoqc.config --show light > mylight.ini
histoqc -c ./mylight.ini -n 3 "*.svs"

Command Line Interface

Show example configuration files

usage: histoqc.config [-h] [--list] [--show NAME]

Named Arguments

--list

list available configs

Default: False

--show

show named example config